next generation sequencing data analysis

Review of selected publications citing Strand NGS

yeshodari April 21, 2016February 1, 2017 Avadis NGS, ChIP-Seq, chip-seq, DNA-Seq, next generation sequencing, NGS, RNA-Seq, rna-seq, small rna-seq, Strand NGSavadis ngs, publications, strand ngs

In 2015, we brought in many new features and improvements based on your requirements and feedback. We expanded the Strand NGS epigenomics toolkit by adding the MeDIP-Seq workflow in the v2.5 release. We also added new features like the alignment workflow and SV detection for split reads (watch the webinar), a browser-based copy number variation (CNV) view … Continue reading “Review of selected publications citing Strand NGS”

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Webinar on Strand NGS Pipeline Manager for streamlining large scale analysis

yeshodari February 1, 2016February 1, 2016 Avadis NGS, ChIP-Seq, chip-seq, DNA-Seq, dna-seq, medip-seq, methyl-seq, next generation sequencing, NGS, Pipeline Manager, RNA-Seq, rna-seq, small rna-seq, Strand NGS

This webinar, will highlight the Strand NGS Pipeline Manager feature. In this webinar, you will learn how to customize pipelines and share them with other Strand NGS users. This webinar will give a brief glimpse of an elaborate pipeline that aligns reads, filters poor-quality matches, computes coverage metrics, identifies variants, checks for sample cross-contamination, and … Continue reading “Webinar on Strand NGS Pipeline Manager for streamlining large scale analysis”