Strand NGS-Calling narrow and broad peaks from ChIP-Seq data

Know about the state-of-the-art algorithms implemented in Strand NGS for detecting the binding sites of transcription factor (narrow peaks) and enriched regions of histone modification (broad peaks) from ChIP-Seq data. Read the benchmarking study on Calling narrow and broad peaks from ChIP-Seq data in Strand NGS by Rohit Gupta and Anita Sathyanarayanan. For more information, … Continue reading “Strand NGS-Calling narrow and broad peaks from ChIP-Seq data”

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Strand NGS v2.5 Release Announced – Know what’s new in it?

Happy to share the release of Strand NGS v2.5. This release comes with many new exciting features and enhancements. Some of the major enhancements include new workflow for MeDIP-Seq analysis, split read alignment, new structural variant caller using split reads, additional RNA QC plots, enhanced RNA-Seq workflow to handle large-scale projects, correlation analysis, meta-data analysis, new … Continue reading “Strand NGS v2.5 Release Announced – Know what’s new in it?”

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Live webinar on Copy Number Detection in Inherited Disorders and Somatic Cancer

Copy number variants constitute a significant fraction of genomic alterations responsible for cancer and various inherited disorders. In a clinical setting, performing focused NGS testing based on a panel of relevant genes is both economical and provides faster results. Thus the ability to detect CNVs from gene panel based NGS tests increases the diagnostic yield … Continue reading “Live webinar on Copy Number Detection in Inherited Disorders and Somatic Cancer”

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Interesting findings by ChIP-Seq and DNA-Seq analysis using Strand NGS

The year 2014 was a great year with exciting features and enhancements updated in Strand NGS. We take this opportunity to thank our clientele and well-wishers for their support and feedback. We wish you all a happy and prosperous new year and look forward to a more fruitful engagement in 2015. In this blog on … Continue reading “Interesting findings by ChIP-Seq and DNA-Seq analysis using Strand NGS”

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Webinar on Integrated Biology Solution with Strand NGS and GeneSpring

Webinar on Integrated Biology Solution with Strand NGS and GeneSpring – Case Study on 19 and 20 November Presented by ‘Agilent Technologies’ and ‘Strand Life Sciences’ Abstract Integrating Next Generation Sequencing data with other omics- studies is now possible with release of GeneSpring 13 and Strand NGS 2.1, opening up newer avenues for analysis and … Continue reading “Webinar on Integrated Biology Solution with Strand NGS and GeneSpring”

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Meet Strand at ASHG 2014 and find out about Strand’s solutions ‘Strand NGS’ and ‘StrandOmics’

Strand is excited to be an exhibitor at the 64th Annual Meeting of the American Society of Human Genetics, San Diego from 18 – 22 October 2014, one of the world’s largest human genetics meetings. At ASHG, Strand will demonstrate the latest version of its state-of-the-art NGS data analysis tool ‘Strand NGS’ and interpretation and reporting platform ‘StrandOmics‘. … Continue reading “Meet Strand at ASHG 2014 and find out about Strand’s solutions ‘Strand NGS’ and ‘StrandOmics’”

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Webinar on Integrated Pathway Analysis in Strand NGS

Webinar on Integrated Pathway Analysis in Strand NGS – 27 August 2014 Presenter:  Dr Veena Hedatale, Senior Application Scientist, Strand Life Sciences Abstract:  Strand NGS (formerly Avadis NGS) supports functional analysis of entities from diverse experiment types to understand their role in a biological process. This webinar will illustrate various ways of integrating next generation sequencing … Continue reading “Webinar on Integrated Pathway Analysis in Strand NGS”

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Configuring SNP detection pipelines for accurate analysis of clinical samples

Webinar of the Month Series: Configuring SNP detection pipelines in Avadis NGS for accurate analysis of clinical samples Presenter:  Dr Vamsi Veeramachaneni, Vice President, Strand Life Sciences Abstract: Running a SNP detection pipeline and identifying high quality variant calls quickly is challenging. This is especially true in the case of clinical labs where multiple panels … Continue reading “Configuring SNP detection pipelines for accurate analysis of clinical samples”

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Webinar: Find Significant SNPs in your Samples

In this month’s webinar, we will show you how to use the Find Significant SNPs analysis workflow in Avadis NGS 1.3. SNP verification and prioritization is one of the most time consuming tasks in variant analysis. The workflows and algorithms built-into Avadis NGS 1.3 make end-to-end SNP analysis easy, intuitive, and accurate. These workflows support … Continue reading “Webinar: Find Significant SNPs in your Samples”

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